Howard Hughes Medical Institute (HHMI) · 1 month ago
AI Engineer - Metabolic Sensor Design
Janelia Research Campus
Full-time
Onsite
Mid, Senior Level
$123K/yr - $200K/yr
3+ years expHoward Hughes Medical Institute (HHMI) is investing significantly in AI-driven projects at its Janelia Research Campus. They are seeking a highly skilled AI Engineer to develop computational infrastructure for AI-powered biosensor optimization, collaborating closely with data scientists and experimentalists to enhance protein biosensor technologies.
BiotechnologyClinical TrialsHealth CareMedicalMedical Device
Responsibilities
Develop and maintain computational infrastructure and predictive tools for AI biosensor optimization, including tool development for modeling fluorescence properties and biochemical performance from sequence and structure
Design and execute rigorous comparative experiments between model architectures
Collaborate with other team members to ensure seamless integration of computational and experimental aspects of the project
Apply machine learning, AI techniques, and software engineering best practices to deliver scalable, maintainable, and reproducible AI systems for protein engineering
Carefully document data, code, and processing pipelines to enable seamless reproduction and extension of research results
Actively contribute to the latest advancements in the field and continuously improve your skillset with the latest advances in AI research and technologies
Collaborate with interdisciplinary teams, potentially mentor junior engineers, and direct or assist in directing the work of others to meet project goals while advising stakeholders on data strategies and best practices
Qualification
Required
PhD in Bioengineering, Computer Science, Data Science, Statistics, Applied Mathematics, or a related field; or an equivalent combination of education and relevant experience
3+ years of experience in developing and fine-tuning deep learning models
Strong programming skills in Python, PyTorch, and JAX
Experience with ML model deployment, workflow orchestration, and high-throughput data processing
Preferred
Domain expertise in sequence or protein structure analysis
Familiarity with protein modeling or machine learning frameworks such as AlphaFold, ESM, Chai-1, or Boltz-1
Familiarity with computer vision deep learning frameworks (e.g., SAM, cellpose)
Benefits
Comprehensive health and welfare benefits
On-site childcare
Free gyms
Available on-campus housing
Social and dining spaces
Convenient shuttle bus service to Janelia from the Washington D.C. metro area
Exceptional health benefits
Retirement plans
Time off
A range of recognition and wellness programs
Company
Howard Hughes Medical Institute (HHMI)
Founded in 1953, HHMI invests in scientists at all career stages who make discoveries that advance human health and our fundamental understanding of biology.
1001-5000 employees
H1B Sponsorship
Howard Hughes Medical Institute (HHMI) has a track record of offering H1B sponsorships. Please note that this does not
guarantee sponsorship for this specific role. Below presents additional info for your
reference. (Data Powered by US Department of Labor)
Distribution of Different Job Fields Receiving Sponsorship
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Trends of Total Sponsorships
2025 (135)
2024 (133)
2023 (133)
2022 (160)
2021 (133)
2020 (127)
Funding
Current Stage
Late StageTotal Funding
$1MKey Investors
Salt Lake Community College
2017-08-31Grant· $1M
Leadership Team
Boyana Konforti
Director of Scientific Strategy & Development
Recent News
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