Goldbelt Apex LLC · 1 week ago
Bioinformatician
Goldbelt Apex is a data-focused company dedicated to process and quality in healthcare technology. They are seeking a qualified Bioinformatician to provide data management and bioinformatics support services, managing epidemiological and laboratory data in collaboration with the CDC.
Responsibilities
Maintain epidemiological and laboratory data by using SAS as well as other data management software packages (e.g., R, REDCap, Microsoft Access, Excel, EpiInfo)
Support the design, development, and implementation of surveillance tools to collect epidemiologic data
Convert existing datasets from a diverse array of file formats (e.g., Microsoft Excel, Access, SQL, and ASCII files) into SAS datasets
Design, program, test, modify, enhance, maintain, and support new surveillance applications to collect epidemiological data
Develop scripts and software for data manipulation, cleaning, analysis, and visualization (using programming languages such as Python, R, BASH, and SQL)
Develop bioinformatics pipelines using parallel programming capabilities through workflow tools, including Snakemake or Nextflow, on Linux-based high-performance computing environments
Transform data sources into appropriate file formats for bioinformatics/epidemiological studies
Conduct data mining and data curation from public sequence databases to support bioinformatics and molecular epidemiological analyses
Work with and/or develop dashboarding tools, including Power BI, Tableau, and R Shiny, to manage and visualize laboratory and epidemiological data
Submit monthly progress report, detailing achievements and progress on sub-tasks a-i. Please also indicate any project obstacles that need to be overcome
Qualification
Required
Master's degree in Computer Science, Bioinformatics, Computational Biology, Life Sciences, Public Health, or related field
Proficiency with Microsoft Office Suite (Word, Excel, PowerPoint)
Core experience with analysis of biological datasets encountered in studies of infectious disease (sequencing, protein, phenotype, or other relevant data types)
Experience with selection/evaluation of computational approaches to perform analyses of biomedical data
Experience with interpretation, reporting, and documentation of computational analyses over biological datasets
US Citizen (birth or naturalization)
Preferred
Experience with SAS, R, Python, SQL
Surveillance pipeline development
Dashboarding tools (Power BI, Tableau, R Shiny)
Public health or CDC program support experience
NOTE: Must be able to potentially obtain security clearances as needed (i.e., Confidential, Secret, or Top Secret)
Benefits
Medical, dental, and vision insurance
A 401(k) plan with company matching
Tax-deferred savings options
Supplementary benefits
Paid time off
Professional development opportunities