This job has closed.

Allen Institute · 10 hours ago

Scientist I - ML/AI algorithms for Multimodal Foundational Models

Seattle, WA

Full-time

Hybrid

New Grad, Entry Level

$92K/yr - $114K/yr

The Allen Institute is dedicated to understanding the principles of life and advancing health through innovative research. They are seeking a Scientist I to develop machine learning algorithms for multimodal data integration aimed at understanding Alzheimer’s disease pathology. The successful candidate will work in a collaborative environment, focusing on cutting-edge computational methodologies in bioscience.

Neuroscience

H1B Sponsored

Responsibilities

Develop modern machine learning algorithms to model multimodal omics data (transcriptional, chromatin accessibility, genetic, spatial, and protein information)

Evaluate ML architectures able to characterize regulators of cell identity and neurodegenerative progression

Implement sequence-based models to predict genetic contributions to disease

Train large-scale models in multi-GPU environments efficiently

Stay at the forefront of advances in AI for multimodal molecular biology

Participate in a highly interactive and multidisciplinary environment

Publish/present findings in peer-reviewed journals/scientific conferences

Qualification

Machine Learning AlgorithmsDeep Learning ArchitecturesComputational BiologyCloud ComputingTransformer ArchitecturesCommunicationTeam CollaborationProject Management

Required

Ph.D. in Computer Science, Applied Math, Engineering, Computational Neuroscience, Computational Biology, or related field, or equivalent combination of degree and experience

Experience working with recent Deep Learning Architectures/Foundational Models

Experience with building, deploying and maintaining machine learning and foundational models

Proficiency with cloud computing (AWS, GCP or Azure) and with on-prem clusters

Proven ability to work independently and manage multiple projects simultaneously while meeting deadlines

Preferred

Experience with modeling gene regulatory networks, chromatin accessibility information, or related computational biology studies

Experience building transformer-based foundational models of cell identity

Working knowledge of AI/ML custom libraries, AI/ML execution platforms

Strong publication track record

Proven ability to work independently and manage multiple projects simultaneously while meeting deadlines in a highly collaborative environment

Excellent written and verbal communication skills, with the ability to collaborate effectively in a multidisciplinary team environment

Benefits

Medical

Dental

Vision

Basic life insurance

401k plan

Paid time off

Company

Allen Institute

Glassdoor3.7

The Allen Institute is dedicated to answering some of the biggest questions in bioscience and accelerating research worldwide.

Founded in 2003

Seattle, Washington, USA

501-1000 employees

https://alleninstitute.org/

H1B Sponsorship

Allen Institute has a track record of offering H1B sponsorships. Please note that this does not guarantee sponsorship for this specific role. Below presents additional info for your reference. (Data Powered by US Department of Labor)

Distribution of Different Job Fields Receiving Sponsorship

Represents job field similar to this job

Trends of Total Sponsorships

2025 (41)

2024 (33)

2023 (25)

2022 (26)

2021 (17)

2020 (7)