Arkhya Tech. Inc. · 17 hours ago
Senior HPC Engineer
United States
Full-time
Remote
Senior LevelArkhya Tech. Inc. is seeking a Senior HPC Engineer to be the single point of contact for design, deployment, maintenance, and optimization of on-prem Linux / High-Performance Computing (HPC) environments. This role involves system administration, software engineering, and collaboration to support bioinformatics pipelines and manage large-scale biological data.
ConsultingSoftwareInformation Technology
Hiring Manager
Eshwar S
Responsibilities
Pipeline Development & Automation : Support integration of existing pipelines on new cluster and help design, develop, and maintain robust, automated bioinformatics pipelines for next-generation sequencing
Software Development : Collaborate with software developers to create or modify custom bioinformatics software and tools, ensuring they are scalable and efficient on the cluster compute environment
Database Management : Create, maintain, and manage databases to store, organize, and track large volumes of biological data and metadata, ensuring data integrity and security
Troubleshooting and Support : Diagnose and resolve technical problems in system configuration, job schedulers, and scientific applications; train and support researchers in the use of tools and infrastructure
Collaboration and Communication : Work effectively within interdisciplinary teams of scientists, bioinformaticians, and IT staff to determine data needs, gather requirements, and present analysis results and reports
Innovation and Evaluation : Research and evaluate new technologies, tools, and algorithms, to improve operations and analytical capabilities
Qualification
Required
Proficiency in relevant languages such as Python, R, and Linux bash scripting is essential
Proven track record of managing data and infrastructure in High-Performance Computing (HPC) clusters is required
Experience with workflow management systems (e.g., Nextflow, Snakemake, WDL) and containerization technologies (e.g., Docker, Singularity)
Knowledge and experience using code management tools, such as Git/GitHub
Strong analytical, problem-solving, and conceptual skills to address complex data challenges
Preferred
Knowledge of cloud computing environments is nice to have
A solid understanding of molecular biology, genomics, and relevant biological domain knowledge (e.g., oncology, rare diseases) is often necessary for context-specific problem-solving
Company
Arkhya Tech. Inc.
Arkhya Technologies, Inc.
Founded in 2014
201-500 employees
H1B Sponsorship
Arkhya Tech. Inc. has a track record of offering H1B sponsorships. Please note that this does not
guarantee sponsorship for this specific role. Below presents additional info for your
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Distribution of Different Job Fields Receiving Sponsorship
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Trends of Total Sponsorships
2023 (1)
2022 (1)
2020 (5)
Funding
Current Stage
Growth StageCompany data provided by crunchbase