Quest Diagnostics · 5 hours ago

Bioinformatics Engineer (Remote)

Marlborough, MA

Full-time

Remote

Mid, Senior Level

5+ years exp

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BiotechnologyHealth Care

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Responsibilities

Execute and improve sequence analysis workflows and automation

Track, troubleshoot and mitigate issues encountered in processing production samples

Assist in planning and development of solutions to recurring issues to be merged back into development branch maintained by the Engineering group

Develop web-based results display and dashboards for clinical geneticists, medical directors and operations lab personnel providing clarity in our process

Generate, wrangle, merge and glean information from varied and complex data sets Design and implementation of RESTful APIs linked to various systems including LIMS, AWS job runners and other systems necessary for data processing and execution

Design and perform validation, testing, and production deployment of systems and software to standardize processes across all Quest Diagnostics genetic testing labs

Design and perform validation analysis for new genomic testing products.

Support production day-to-day operations

Write and maintain production documentation for compliance and supportability of all bioinformatics processes in production environment

Work directly with medical/quality/compliance to identify, track, resolve and report on any relevant quality-related issues

Produce charts and visualization for dashboards, reporting, and in support of data driven hypothesis testing

Perform LIS support duties (maintain database for user, tests, clients….)

Support interface, integration, and testing projects

Utilize a Software Development Life Cycle documentation procedure

Be an active team player and support the group

Accept input on solutions from other colleagues and teams

Qualification

Find out how your skills align with this job's requirements. If anything seems off, you can easily click on the tags to select or unselect skills to reflect your actual expertise.

Programming languagesLinux command-lineAPI communicationsDistributed HPC environmentGenomics knowledgeSoftware developmentSource controlAutomated testingCI/CDCAP documentationPythonPERLGroovyJavaScriptTerraformPython FlaskReact NativeBootstrapR Statistical LanguageIPythonJupyterPlotlyMatplotlibGgplot2/tidyverseTableauD3.jsSQLPostgreSQLMySQLMongoDB